Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
KNTC1P50748 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 AL022313.4-201ENST00000562756 2046 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
KNTC1P50748 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 HSD3BP1-201ENST00000286193 1111 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.2□□□□□ -0.3
KNTC1P50748 AC025594.1-201ENST00000469533 543 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.2□□□□□ -0.3
KNTC1P50748 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.2□□□□□ -0.3
KNTC1P50748 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.2□□□□□ -0.3
KNTC1P50748 ABCC6P1-203ENST00000565566 1170 ntBASIC13.2□□□□□ -0.3
KNTC1P50748 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.2□□□□□ -0.3
KNTC1P50748 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
KNTC1P50748 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.2□□□□□ -0.3
KNTC1P50748 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
KNTC1P50748 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KNTC1P50748 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KNTC1P50748 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 U3.5-201ENST00000363448 216 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
KNTC1P50748 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 AL137244.1-201ENST00000422931 865 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 RN7SL523P-201ENST00000484401 298 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 RN7SL440P-201ENST00000577855 343 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 AC123912.6-201ENST00000612657 315 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.19□□□□□ -0.3
KNTC1P50748 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 LINC02228-204ENST00000642115 2962 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
KNTC1P50748 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.19□□□□□ -0.3
KNTC1P50748 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.19□□□□□ -0.3
KNTC1P50748 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KNTC1P50748 RN7SL173P-201ENST00000461853 292 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 AC008494.1-201ENST00000497612 796 ntBASIC13.19□□□□□ -0.3
KNTC1P50748 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.19□□□□□ -0.3
KNTC1P50748 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.19□□□□□ -0.3
KNTC1P50748 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.19□□□□□ -0.3
KNTC1P50748 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.19□□□□□ -0.3
KNTC1P50748 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms