Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 AC093752.3-201ENST00000567343 901 ntBASIC14.53□□□□□ -0.08
MMP13P45452 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.53□□□□□ -0.08
MMP13P45452 CR392039.2-201ENST00000623182 509 ntBASIC14.53□□□□□ -0.08
MMP13P45452 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 AC104758.3-203ENST00000562938 2123 ntBASIC14.53□□□□□ -0.08
MMP13P45452 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 LINC00567-201ENST00000569854 3409 ntBASIC14.53□□□□□ -0.08
MMP13P45452 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
MMP13P45452 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MMP13P45452 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.52□□□□□ -0.08
MMP13P45452 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
MMP13P45452 LINC01815-202ENST00000641468 1409 ntBASIC14.52□□□□□ -0.08
MMP13P45452 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
MMP13P45452 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP13P45452 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.52□□□□□ -0.08
MMP13P45452 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.52□□□□□ -0.08
MMP13P45452 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.52□□□□□ -0.09
MMP13P45452 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 AC239868.1-201ENST00000369385 493 ntBASIC14.52□□□□□ -0.09
MMP13P45452 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.52□□□□□ -0.09
MMP13P45452 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 HIST2H2BC-201ENST00000498492 580 ntBASIC14.52□□□□□ -0.09
MMP13P45452 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
MMP13P45452 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 AC108024.1-201ENST00000626286 1721 ntBASIC14.52□□□□□ -0.09
MMP13P45452 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP13P45452 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP13P45452 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP13P45452 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MMP13P45452 AC073869.1-201ENST00000415574 2762 ntBASIC14.51□□□□□ -0.09
MMP13P45452 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.51□□□□□ -0.09
MMP13P45452 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MMP13P45452 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
MMP13P45452 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.51□□□□□ -0.09
MMP13P45452 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MMP13P45452 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 SHMT1P1-201ENST00000419974 1312 ntBASIC14.51□□□□□ -0.09
MMP13P45452 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MMP13P45452 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms