Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SLC1A1P43005 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
SLC1A1P43005 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.58□□□□□ -0.07
SLC1A1P43005 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SLC1A1P43005 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SLC1A1P43005 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SLC1A1P43005 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC1A1P43005 NKAIN1P1-201ENST00000435754 582 ntBASIC14.58□□□□□ -0.08
SLC1A1P43005 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC1A1P43005 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC1A1P43005 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SLC1A1P43005 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.58□□□□□ -0.08
SLC1A1P43005 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC1A1P43005 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 AL008638.5-201ENST00000623814 1298 ntBASIC14.58□□□□□ -0.08
SLC1A1P43005 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC1A1P43005 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SLC1A1P43005 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC1A1P43005 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 KRT17P5-201ENST00000332088 839 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 AC239868.1-201ENST00000369385 493 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC1A1P43005 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 ATP5G2P4-201ENST00000442175 420 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 AC004898.1-201ENST00000451057 766 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
SLC1A1P43005 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC1A1P43005 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SLC1A1P43005 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms