Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.86□□□□□ -0.19
VARSP26640 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 ZNF736P11Y-201ENST00000442535 1213 ntBASIC13.86□□□□□ -0.19
VARSP26640 ZNF736P12Y-201ENST00000443152 1243 ntBASIC13.86□□□□□ -0.19
VARSP26640 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 ZNF736P4Y-201ENST00000454995 1243 ntBASIC13.86□□□□□ -0.19
VARSP26640 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VARSP26640 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
VARSP26640 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 AC090386.2-201ENST00000623010 1039 ntBASIC13.86□□□□□ -0.19
VARSP26640 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 AC068587.8-201ENST00000641239 219 ntBASIC13.86□□□□□ -0.19
VARSP26640 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.86□□□□□ -0.19
VARSP26640 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VARSP26640 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 AC016700.1-201ENST00000429424 312 ntBASIC13.85□□□□□ -0.19
VARSP26640 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 RPS2P36-201ENST00000456516 831 ntBASIC13.85□□□□□ -0.19
VARSP26640 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.85□□□□□ -0.19
VARSP26640 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 RN7SL163P-201ENST00000583100 276 ntBASIC13.85□□□□□ -0.19
VARSP26640 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.85□□□□□ -0.19
VARSP26640 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 AC090164.2-201ENST00000611487 516 ntBASIC13.85□□□□□ -0.19
VARSP26640 AP000346.4-201ENST00000614827 381 ntBASIC13.85□□□□□ -0.19
VARSP26640 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.85□□□□□ -0.19
VARSP26640 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms