Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.1□□□□□ -0.15
VCLP18206 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 AGAP10P-201ENST00000454844 2418 ntBASIC14.1□□□□□ -0.15
VCLP18206 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 ELK2AP-201ENST00000392510 1007 ntBASIC14.1□□□□□ -0.15
VCLP18206 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.1□□□□□ -0.15
VCLP18206 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 AC092580.1-201ENST00000433998 658 ntBASIC14.1□□□□□ -0.15
VCLP18206 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.1□□□□□ -0.15
VCLP18206 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.1□□□□□ -0.15
VCLP18206 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 DUX4L50-201ENST00000455245 715 ntBASIC14.1□□□□□ -0.15
VCLP18206 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.1□□□□□ -0.15
VCLP18206 AC008723.1-201ENST00000506922 207 ntBASIC14.1□□□□□ -0.15
VCLP18206 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VCLP18206 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 LINC01783-202ENST00000614408 828 ntBASIC14.1□□□□□ -0.15
VCLP18206 BX284668.2-205ENST00000619677 828 ntBASIC14.1□□□□□ -0.15
VCLP18206 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 LINC01165-201ENST00000445190 1623 ntBASIC14.1□□□□□ -0.15
VCLP18206 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VCLP18206 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VCLP18206 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VCLP18206 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
VCLP18206 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
VCLP18206 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.09□□□□□ -0.15
VCLP18206 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 NUP210P1-202ENST00000504322 710 ntBASIC14.09□□□□□ -0.15
VCLP18206 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
VCLP18206 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.09□□□□□ -0.15
VCLP18206 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
VCLP18206 AL022334.2-201ENST00000610000 484 ntBASIC14.09□□□□□ -0.15
VCLP18206 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 CCT8L1P-201ENST00000465400 1674 ntBASIC14.09□□□□□ -0.15
VCLP18206 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms