Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RCC2P5-201ENST00000492126 1487 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 AGAP12P-201ENST00000585227 2359 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
FREM3P0C091 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
FREM3P0C091 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 GRPEL2P1-201ENST00000453145 339 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 AC068867.1-201ENST00000559855 150 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 MIR5196-201ENST00000578146 115 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 AC091769.1-201ENST00000619576 568 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 AC025183.3-201ENST00000623526 1482 ntBASIC12.63□□□□□ -0.39
FREM3P0C091 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
FREM3P0C091 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.63□□□□□ -0.39
FREM3P0C091 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FREM3P0C091 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 RPL3P2-204ENST00000413027 1203 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 GOLGA2P8-201ENST00000505201 779 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.62□□□□□ -0.39
FREM3P0C091 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
FREM3P0C091 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FREM3P0C091 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 AL445209.1-201ENST00000607269 3491 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 LINC00638-201ENST00000555578 2518 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms