Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.85□□□□□ -0.51
CD3DP04234 AC124068.2-201ENST00000569473 1109 ntBASIC11.85□□□□□ -0.51
CD3DP04234 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.85□□□□□ -0.51
CD3DP04234 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.85□□□□□ -0.51
CD3DP04234 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 CICP9-201ENST00000444451 1913 ntBASIC11.85□□□□□ -0.51
CD3DP04234 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.85□□□□□ -0.51
CD3DP04234 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD3DP04234 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
CD3DP04234 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 AC093462.1-201ENST00000621167 1683 ntBASIC11.84□□□□□ -0.51
CD3DP04234 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 AL139158.3-201ENST00000641212 1562 ntBASIC11.84□□□□□ -0.51
CD3DP04234 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 AC010141.1-201ENST00000411585 623 ntBASIC11.84□□□□□ -0.51
CD3DP04234 AL645933.1-201ENST00000440087 609 ntBASIC11.84□□□□□ -0.51
CD3DP04234 ELK1P1-201ENST00000485699 580 ntBASIC11.84□□□□□ -0.51
CD3DP04234 AC022217.1-201ENST00000521069 738 ntBASIC11.84□□□□□ -0.51
CD3DP04234 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 RBM8B-201ENST00000555532 525 ntBASIC11.84□□□□□ -0.51
CD3DP04234 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CD3DP04234 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.84□□□□□ -0.51
CD3DP04234 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD3DP04234 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD3DP04234 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.84□□□□□ -0.51
CD3DP04234 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD3DP04234 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.83□□□□□ -0.51
CD3DP04234 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
CD3DP04234 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD3DP04234 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD3DP04234 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD3DP04234 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD3DP04234 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD3DP04234 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms