Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.88□□□□□ -0.03
O00370 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.88□□□□□ -0.03
O00370 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.88□□□□□ -0.03
O00370 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
O00370 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
O00370 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
O00370 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
O00370 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 PCDHA6-201ENST00000378126 3267 ntBASIC14.87□□□□□ -0.03
O00370 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
O00370 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
O00370 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.87□□□□□ -0.03
O00370 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.87□□□□□ -0.03
O00370 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 AC234782.1-201ENST00000451950 919 ntBASIC14.87□□□□□ -0.03
O00370 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.87□□□□□ -0.03
O00370 NDUFS6P1-201ENST00000485187 316 ntBASIC14.87□□□□□ -0.03
O00370 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.87□□□□□ -0.03
O00370 AC134698.3-201ENST00000523880 214 ntBASIC14.87□□□□□ -0.03
O00370 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.87□□□□□ -0.03
O00370 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.87□□□□□ -0.03
O00370 AL133499.1-201ENST00000596207 608 ntBASIC14.87□□□□□ -0.03
O00370 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
O00370 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.87□□□□□ -0.03
O00370 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
O00370 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 AC004623.1-201ENST00000624592 2127 ntBASIC14.87□□□□□ -0.03
O00370 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.87□□□□□ -0.03
O00370 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
O00370 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
O00370 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.87□□□□□ -0.03
O00370 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
O00370 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
O00370 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
O00370 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
O00370 TBC1D27-202ENST00000424239 1573 ntBASIC14.86□□□□□ -0.03
O00370 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.86□□□□□ -0.03
O00370 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
O00370 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.86□□□□□ -0.03
O00370 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
O00370 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
O00370 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
O00370 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.86□□□□□ -0.03
O00370 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 AC015967.2-201ENST00000624092 234 ntBASIC14.86□□□□□ -0.03
O00370 AC006435.4-201ENST00000625037 234 ntBASIC14.86□□□□□ -0.03
O00370 AL356737.1-201ENST00000634391 234 ntBASIC14.86□□□□□ -0.03
O00370 AL139424.3-202ENST00000641619 917 ntBASIC14.86□□□□□ -0.03
O00370 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 AL445209.1-201ENST00000607269 3491 ntBASIC14.86□□□□□ -0.03
O00370 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.86□□□□□ -0.03
O00370 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms