Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MKRN5P-201ENST00000445263 1467 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SHMT1P1-201ENST00000419974 1312 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 CSPG4P11-201ENST00000560634 4910 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AC011742.3-201ENST00000439053 820 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AK2P2-201ENST00000439142 405 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AC006033.1-201ENST00000440505 426 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 MIR3188-201ENST00000583494 85 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AL118558.3-201ENST00000607414 1079 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 AC138649.2-201ENST00000615886 705 ntBASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.59□□□□□ -0.71
HLA-DRB4X5D2U9 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SLC9A3P3-201ENST00000457608 2229 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC107375.1-201ENST00000564464 2231 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms