Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC008038.1-201ENST00000634247 1314 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 CICP4-201ENST00000447359 2812 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 RPSAP16-201ENST00000447583 821 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AL161727.1-201ENST00000457409 530 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 CETN3-205ENST00000522842 664 ntTSL 2 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC120498.5-201ENST00000561757 299 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC14.72□□□□□ -0.05
HERVK_113Q902F9 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HERVK_113Q902F9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 RCC2P1-201ENST00000452257 1476 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 MIR3940-201ENST00000579148 102 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC022001.3-201ENST00000606330 596 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AC089987.1-201ENST00000551654 2209 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.71□□□□□ -0.05
HERVK_113Q902F9 AL031590.1-202ENST00000641466 1737 ntBASIC14.71□□□□□ -0.05
HERVK_113Q902F9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
HERVK_113Q902F9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms