Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC011247.3-201ENST00000603297 438 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AL031673.1-201ENST00000611460 466 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC004554.1-201ENST00000422830 1468 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC013553.1-201ENST00000560906 267 ntBASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 AC068760.1-201ENST00000493579 1953 ntBASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.62□□□□□ -0.07
SHKBP1Q8TBC3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AL672207.1-201ENST00000328462 1570 ntBASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms