Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 MIR3940-201ENST00000579148 102 ntBASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 AC005777.1-201ENST00000588332 187 ntBASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 AC113385.2-201ENST00000614465 762 ntBASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHROOM1Q2M3G4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ANKRD26P1-203ENST00000569528 966 ntBASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 NAV1-210ENST00000593583 726 ntBASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SHROOM1Q2M3G4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 NRADDP-201ENST00000437305 691 ntBASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 KNOP1P1-201ENST00000542108 989 ntBASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TYMSP2-201ENST00000589501 424 ntBASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 BX322534.1-201ENST00000635574 241 ntBASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 AC215524.1-201ENST00000635696 241 ntBASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHROOM1Q2M3G4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms