Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.81□□□□□ -0.52
SSBP1Q04837 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.81□□□□□ -0.52
SSBP1Q04837 AC093214.1-201ENST00000511688 1107 ntBASIC11.81□□□□□ -0.52
SSBP1Q04837 RNA5SP486-201ENST00000515961 83 ntBASIC11.81□□□□□ -0.52
SSBP1Q04837 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 CR383656.12-201ENST00000549567 513 ntBASIC11.81□□□□□ -0.52
SSBP1Q04837 AC003686.1-201ENST00000550956 1034 ntBASIC11.81□□□□□ -0.52
SSBP1Q04837 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.81□□□□□ -0.52
SSBP1Q04837 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SSBP1Q04837 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 AC022400.8-201ENST00000623453 3599 ntBASIC11.81□□□□□ -0.52
SSBP1Q04837 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SSBP1Q04837 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP1Q04837 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP1Q04837 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP1Q04837 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC008132.1-202ENST00000342005 1389 ntBASIC11.8□□□□□ -0.52
SSBP1Q04837 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 AL355994.2-201ENST00000447882 704 ntBASIC11.8□□□□□ -0.52
SSBP1Q04837 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC025279.2-201ENST00000569730 653 ntBASIC11.8□□□□□ -0.52
SSBP1Q04837 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.8□□□□□ -0.52
SSBP1Q04837 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.8□□□□□ -0.52
SSBP1Q04837 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 ECM1P1-201ENST00000604092 1279 ntBASIC11.8□□□□□ -0.52
SSBP1Q04837 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.8□□□□□ -0.52
SSBP1Q04837 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SSBP1Q04837 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSBP1Q04837 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms