Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA3P59666 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC12.21□□□□□ -0.45
DEFA3P59666 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
DEFA3P59666 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
DEFA3P59666 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
DEFA3P59666 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 MSTO2P-201ENST00000314835 1709 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA3P59666 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
DEFA3P59666 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA3P59666 FAM197Y8-203ENST00000450145 560 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA3P59666 AL079307.3-201ENST00000556114 283 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA3P59666 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.21□□□□□ -0.45
DEFA3P59666 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
DEFA3P59666 AC003101.2-201ENST00000612557 442 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 AL662799.1-202ENST00000614205 422 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA3P59666 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
DEFA3P59666 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 LINC02228-202ENST00000641261 2489 ntBASIC12.21□□□□□ -0.45
DEFA3P59666 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA3P59666 AC008806.1-201ENST00000624962 2443 ntBASIC12.21□□□□□ -0.46
DEFA3P59666 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA3P59666 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA3P59666 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA3P59666 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.21□□□□□ -0.46
DEFA3P59666 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA3P59666 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.21□□□□□ -0.46
DEFA3P59666 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA3P59666 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.21□□□□□ -0.46
DEFA3P59666 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DEFA3P59666 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 AL590824.1-201ENST00000403828 1349 ntBASIC12.2□□□□□ -0.46
DEFA3P59666 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
DEFA3P59666 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 PMS2P2-201ENST00000425039 1128 ntBASIC12.2□□□□□ -0.46
DEFA3P59666 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.2□□□□□ -0.46
DEFA3P59666 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.2□□□□□ -0.46
DEFA3P59666 KRT18P15-201ENST00000458108 1291 ntBASIC12.2□□□□□ -0.46
DEFA3P59666 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.2□□□□□ -0.46
DEFA3P59666 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DEFA3P59666 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 BX088702.1-201ENST00000610784 235 ntBASIC12.2□□□□□ -0.46
DEFA3P59666 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms