Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN6P56747 KRT8P30-201ENST00000432100 650 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 RPS18P9-201ENST00000482817 460 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC132825.4-202ENST00000578792 434 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN6P56747 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 AL049840.2-201ENST00000602722 535 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 AC011462.4-201ENST00000616866 449 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC010531.8-201ENST00000623341 685 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC233280.19-201ENST00000633223 136 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 AL022313.4-201ENST00000562756 2046 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN6P56747 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN6P56747 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN6P56747 OR2W2P-201ENST00000406313 909 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN6P56747 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 DPY19L2P4-201ENST00000479881 442 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDN6P56747 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDN6P56747 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 AC120498.7-201ENST00000562876 330 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN6P56747 FBXO36P1-201ENST00000579006 471 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN6P56747 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 AC068760.1-201ENST00000493579 1953 ntBASIC13.34□□□□□ -0.27
CLDN6P56747 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN6P56747 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN6P56747 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CLDN6P56747 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.33□□□□□ -0.27
CLDN6P56747 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDN6P56747 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDN6P56747 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN6P56747 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms