Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.06□□□□□ -0.32
PER3P56645 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 BCAS2P2-201ENST00000425064 674 ntBASIC13.06□□□□□ -0.32
PER3P56645 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.06□□□□□ -0.32
PER3P56645 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 KRT18P66-201ENST00000452970 1269 ntBASIC13.06□□□□□ -0.32
PER3P56645 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 AC006122.1-201ENST00000493323 440 ntBASIC13.06□□□□□ -0.32
PER3P56645 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.06□□□□□ -0.32
PER3P56645 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
PER3P56645 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 OR2I1P-208ENST00000641137 4948 ntBASIC13.06□□□□□ -0.32
PER3P56645 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.06□□□□□ -0.32
PER3P56645 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 BAK1P1-201ENST00000317045 636 ntBASIC13.05□□□□□ -0.32
PER3P56645 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 TSPY25P-201ENST00000429463 745 ntBASIC13.05□□□□□ -0.32
PER3P56645 AL157407.1-201ENST00000435784 904 ntBASIC13.05□□□□□ -0.32
PER3P56645 AL139008.1-201ENST00000437894 228 ntBASIC13.05□□□□□ -0.32
PER3P56645 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.05□□□□□ -0.32
PER3P56645 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.05□□□□□ -0.32
PER3P56645 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 RN7SL470P-201ENST00000583069 259 ntBASIC13.05□□□□□ -0.32
PER3P56645 MIR4472-1-201ENST00000584349 80 ntBASIC13.05□□□□□ -0.32
PER3P56645 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.05□□□□□ -0.32
PER3P56645 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 AL161773.1-201ENST00000624845 863 ntBASIC13.05□□□□□ -0.32
PER3P56645 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms