Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 LINC00265-2P-201ENST00000413372 782 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC018638.5-201ENST00000450885 754 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 OR5BD1P-201ENST00000532527 817 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC145285.5-201ENST00000562217 361 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC087392.5-201ENST00000612517 489 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 COX6A1P2-201ENST00000620597 330 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 PDXDC2P-206ENST00000534700 1315 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC138761.6-201ENST00000583997 1423 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 KRT8P24-201ENST00000560290 1559 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC083964.2-201ENST00000623988 2396 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC019294.4-201ENST00000561777 2905 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 Z69890.1-201ENST00000382990 339 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 RN7SKP109-201ENST00000410592 316 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 RPL3P2-204ENST00000413027 1203 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 MPRIPP1-201ENST00000452433 1089 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 RNA5SP417-201ENST00000516459 108 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AP000911.2-201ENST00000534330 502 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 MIR4265-201ENST00000582152 99 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 AL031673.1-201ENST00000611460 466 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC073911.3-201ENST00000624401 631 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC011491.1-203ENST00000637688 543 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC092978.1-202ENST00000637590 1327 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 AC073869.1-201ENST00000415574 2762 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 IL9RP3-201ENST00000442856 1674 ntBASIC14.8□□□□□ -0.04
CACNA2D1P54289 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms