Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 RN7SKP212-201ENST00000410851 328 ntBASIC18.29■□□□□ 0.52
USP6P35125 AP001331.1-201ENST00000413008 1015 ntBASIC18.29■□□□□ 0.52
USP6P35125 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USP6P35125 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 DUX4L31-201ENST00000446466 1136 ntBASIC18.29■□□□□ 0.52
USP6P35125 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 RN7SL789P-201ENST00000478944 293 ntBASIC18.29■□□□□ 0.52
USP6P35125 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC18.29■□□□□ 0.52
USP6P35125 IGHVII-33-1-201ENST00000524010 280 ntBASIC18.29■□□□□ 0.52
USP6P35125 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6P35125 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC18.29■□□□□ 0.52
USP6P35125 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC18.29■□□□□ 0.52
USP6P35125 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 BEND3P1-201ENST00000421591 1944 ntBASIC18.29■□□□□ 0.52
USP6P35125 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 AC026271.1-201ENST00000447794 1348 ntBASIC18.29■□□□□ 0.52
USP6P35125 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 LINC00638-201ENST00000555578 2518 ntBASIC18.28■□□□□ 0.52
USP6P35125 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6P35125 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 ATF4P4-201ENST00000393544 1930 ntBASIC18.28■□□□□ 0.52
USP6P35125 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 TBC1D3P1-201ENST00000590047 1693 ntBASIC18.28■□□□□ 0.52
USP6P35125 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 IQCF4-203ENST00000428561 420 ntBASIC18.28■□□□□ 0.52
USP6P35125 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6P35125 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC18.28■□□□□ 0.52
USP6P35125 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 PMEL-214ENST00000550447 901 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6P35125 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6P35125 AC138627.1-201ENST00000641127 1257 ntBASIC18.28■□□□□ 0.52
USP6P35125 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP6P35125 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
USP6P35125 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6P35125 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6P35125 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP6P35125 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
USP6P35125 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC18.27■□□□□ 0.52
USP6P35125 AC007336.3-201ENST00000623886 2160 ntBASIC18.27■□□□□ 0.52
USP6P35125 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP6P35125 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 SNRPCP15-201ENST00000424055 192 ntBASIC18.27■□□□□ 0.52
USP6P35125 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6P35125 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6P35125 SLC25A51P3-201ENST00000521814 889 ntBASIC18.27■□□□□ 0.52
USP6P35125 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.27■□□□□ 0.52
USP6P35125 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 PCTP-206ENST00000573500 919 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6P35125 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6P35125 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC18.27■□□□□ 0.52
USP6P35125 AC139100.2-201ENST00000616901 662 ntBASIC18.27■□□□□ 0.52
USP6P35125 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC18.27■□□□□ 0.52
USP6P35125 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms