Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL353708.1-201ENST00000567904 1257 ntBASIC18.98■□□□□ 0.63
CPS1P31327 AP001505.1-201ENST00000569966 824 ntBASIC18.98■□□□□ 0.63
CPS1P31327 AL589743.3-201ENST00000604121 517 ntBASIC18.98■□□□□ 0.63
CPS1P31327 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CPS1P31327 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC18.97■□□□□ 0.63
CPS1P31327 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.97■□□□□ 0.63
CPS1P31327 AP000343.1-201ENST00000440602 385 ntBASIC18.97■□□□□ 0.63
CPS1P31327 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC18.97■□□□□ 0.63
CPS1P31327 AC009238.3-201ENST00000512705 217 ntBASIC18.97■□□□□ 0.63
CPS1P31327 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC18.97■□□□□ 0.63
CPS1P31327 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.97■□□□□ 0.63
CPS1P31327 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC18.97■□□□□ 0.63
CPS1P31327 DBET-201ENST00000630918 3363 ntBASIC18.97■□□□□ 0.63
CPS1P31327 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.97■□□□□ 0.63
CPS1P31327 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CPS1P31327 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPS1P31327 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC18.97■□□□□ 0.63
CPS1P31327 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 AC024475.2-201ENST00000312173 879 ntBASIC18.96■□□□□ 0.63
CPS1P31327 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CPS1P31327 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 SNORD23-201ENST00000408876 110 ntBASIC18.96■□□□□ 0.63
CPS1P31327 RNA5SP407-201ENST00000410275 110 ntBASIC18.96■□□□□ 0.63
CPS1P31327 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 AC067942.1-202ENST00000471756 1057 ntBASIC18.96■□□□□ 0.63
CPS1P31327 AK2-208ENST00000487289 920 ntTSL 2 BASIC18.96■□□□□ 0.63
CPS1P31327 AC253536.5-201ENST00000506097 347 ntBASIC18.96■□□□□ 0.63
CPS1P31327 ST3GAL1P1-201ENST00000513810 1014 ntBASIC18.96■□□□□ 0.63
CPS1P31327 PIGCP1-201ENST00000527583 895 ntBASIC18.96■□□□□ 0.63
CPS1P31327 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC18.96■□□□□ 0.63
CPS1P31327 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC18.96■□□□□ 0.63
CPS1P31327 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CPS1P31327 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC18.96■□□□□ 0.63
CPS1P31327 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.96■□□□□ 0.63
CPS1P31327 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
CPS1P31327 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPS1P31327 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.96■□□□□ 0.63
CPS1P31327 FAM90A27P-201ENST00000593323 1370 ntBASIC18.96■□□□□ 0.62
CPS1P31327 FAM90A28P-202ENST00000597191 1374 ntBASIC18.96■□□□□ 0.62
CPS1P31327 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC18.95■□□□□ 0.62
CPS1P31327 AKR1B1P3-201ENST00000525311 588 ntBASIC18.95■□□□□ 0.62
CPS1P31327 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CPS1P31327 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms