Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.12□□□□□ -0.15
VCLP18206 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.12□□□□□ -0.15
VCLP18206 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.12□□□□□ -0.15
VCLP18206 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.12□□□□□ -0.15
VCLP18206 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 AC091812.3-201ENST00000621362 345 ntBASIC14.12□□□□□ -0.15
VCLP18206 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.12□□□□□ -0.15
VCLP18206 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 AP002353.1-201ENST00000528257 1599 ntBASIC14.12□□□□□ -0.15
VCLP18206 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.12□□□□□ -0.15
VCLP18206 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VCLP18206 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VCLP18206 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 RNA5SP359-201ENST00000364838 113 ntBASIC14.11□□□□□ -0.15
VCLP18206 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.11□□□□□ -0.15
VCLP18206 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.11□□□□□ -0.15
VCLP18206 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.11□□□□□ -0.15
VCLP18206 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.11□□□□□ -0.15
VCLP18206 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 MIR6769A-201ENST00000617340 73 ntBASIC14.11□□□□□ -0.15
VCLP18206 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 AC072061.1-201ENST00000569710 2234 ntBASIC14.11□□□□□ -0.15
VCLP18206 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VCLP18206 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.11□□□□□ -0.15
VCLP18206 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms