Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 ELK2AP-201ENST00000392510 1007 ntBASIC12.53□□□□□ -0.4
HLA-DOBP13765 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC073869.2-201ENST00000417338 1026 ntBASIC12.53□□□□□ -0.4
HLA-DOBP13765 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 POU5F1P2-201ENST00000521750 823 ntBASIC12.53□□□□□ -0.4
HLA-DOBP13765 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 NDUFB10P1-201ENST00000567319 521 ntBASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 AC009474.1-201ENST00000455096 1565 ntBASIC12.52□□□□□ -0.4
HLA-DOBP13765 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DOBP13765 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
HLA-DOBP13765 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SNORA50C-201ENST00000408535 133 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 RPSAP15-201ENST00000448168 861 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 AC012618.1-201ENST00000461223 412 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 PHBP15-201ENST00000574228 665 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 LINC01783-202ENST00000614408 828 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 BX284668.2-205ENST00000619677 828 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 SNORA50.1-201ENST00000628590 135 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 CICP8-201ENST00000455800 2813 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms