Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC135983.4-201ENST00000564116 1262 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC112187.3-201ENST00000607844 408 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC021016.3-201ENST00000608367 477 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AL022334.2-201ENST00000610000 484 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AP003419.4-201ENST00000616071 517 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC242376.2-201ENST00000619355 883 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC118758.2-201ENST00000614242 2813 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 PPT1-213ENST00000641319 2388 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCNYL3P0C7X3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CCNYL3P0C7X3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 KRT8P31-201ENST00000504812 1408 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 Z69890.1-201ENST00000382990 339 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 MIR557-201ENST00000385239 98 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 RPSAP31-201ENST00000416648 895 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 RN7SL818P-201ENST00000485099 259 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 NPM1P43-201ENST00000558669 786 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 RN7SL725P-201ENST00000606439 259 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 MIR6074-201ENST00000612054 107 ntBASIC13.64□□□□□ -0.23
CCNYL3P0C7X3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms