Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PER1-202ENST00000354903 3115 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 TSPY16P-201ENST00000449843 468 ntBASIC15.11■□□□□ 0.01
CCDC175P0C221 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC175P0C221 AC003686.1-201ENST00000550956 1034 ntBASIC15.11■□□□□ 0.01
CCDC175P0C221 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC175P0C221 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 AC140912.1-201ENST00000577171 1054 ntBASIC15.11■□□□□ 0.01
CCDC175P0C221 AL161773.1-201ENST00000624845 863 ntBASIC15.11■□□□□ 0.01
CCDC175P0C221 RPL13AP3-202ENST00000494676 1473 ntBASIC15.11■□□□□ 0.01
CCDC175P0C221 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC175P0C221 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 AC244394.1-201ENST00000435000 1665 ntBASIC15.1■□□□□ 0.01
CCDC175P0C221 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC175P0C221 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.1■□□□□ 0.01
CCDC175P0C221 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC175P0C221 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC175P0C221 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC175P0C221 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
CCDC175P0C221 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCDC175P0C221 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 AL805961.2-201ENST00000642139 4817 ntBASIC15.1■□□□□ 0.01
CCDC175P0C221 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC175P0C221 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC175P0C221 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC175P0C221 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC175P0C221 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC175P0C221 AL031432.4-201ENST00000641729 2190 ntBASIC15.09■□□□□ 0.01
CCDC175P0C221 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC175P0C221 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC175P0C221 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC175P0C221 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC175P0C221 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC175P0C221 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC175P0C221 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms