Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
THBS1P07996 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.9□□□□□ -0.34
THBS1P07996 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
THBS1P07996 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 NKAIN1P1-201ENST00000435754 582 ntBASIC12.9□□□□□ -0.34
THBS1P07996 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.9□□□□□ -0.34
THBS1P07996 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.9□□□□□ -0.34
THBS1P07996 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC12.9□□□□□ -0.34
THBS1P07996 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.9□□□□□ -0.34
THBS1P07996 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC12.9□□□□□ -0.34
THBS1P07996 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 CICP8-201ENST00000455800 2813 ntBASIC12.9□□□□□ -0.34
THBS1P07996 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
THBS1P07996 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
THBS1P07996 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
THBS1P07996 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 AC067931.2-201ENST00000623655 2003 ntBASIC12.89□□□□□ -0.35
THBS1P07996 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.89□□□□□ -0.35
THBS1P07996 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 AC239868.1-201ENST00000369385 493 ntBASIC12.89□□□□□ -0.35
THBS1P07996 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.89□□□□□ -0.35
THBS1P07996 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.89□□□□□ -0.35
THBS1P07996 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.89□□□□□ -0.35
THBS1P07996 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 MIR3619-201ENST00000579667 83 ntBASIC12.89□□□□□ -0.35
THBS1P07996 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 AC026740.1-201ENST00000607068 791 ntBASIC12.89□□□□□ -0.35
THBS1P07996 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
THBS1P07996 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms