Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.07□□□□□ -0.16
RETP07949 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.07□□□□□ -0.16
RETP07949 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 ST20-AS1-201ENST00000560255 4223 ntBASIC14.07□□□□□ -0.16
RETP07949 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.07□□□□□ -0.16
RETP07949 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.06□□□□□ -0.16
RETP07949 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.06□□□□□ -0.16
RETP07949 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RETP07949 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RETP07949 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.06□□□□□ -0.16
RETP07949 PSAT1P2-201ENST00000426107 972 ntBASIC14.06□□□□□ -0.16
RETP07949 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.06□□□□□ -0.16
RETP07949 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.06□□□□□ -0.16
RETP07949 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.06□□□□□ -0.16
RETP07949 IGHEP2-201ENST00000519308 1256 ntBASIC14.06□□□□□ -0.16
RETP07949 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.06□□□□□ -0.16
RETP07949 KRT18P37-201ENST00000520711 1282 ntBASIC14.06□□□□□ -0.16
RETP07949 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.06□□□□□ -0.16
RETP07949 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.06□□□□□ -0.16
RETP07949 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.06□□□□□ -0.16
RETP07949 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.06□□□□□ -0.16
RETP07949 CES1P2-201ENST00000566467 1242 ntBASIC14.06□□□□□ -0.16
RETP07949 FBXO36P1-201ENST00000579006 471 ntBASIC14.06□□□□□ -0.16
RETP07949 TYMSP2-201ENST00000589501 424 ntBASIC14.06□□□□□ -0.16
RETP07949 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.06□□□□□ -0.16
RETP07949 CICP17-201ENST00000418553 2377 ntBASIC14.06□□□□□ -0.16
RETP07949 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.06□□□□□ -0.16
RETP07949 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RETP07949 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.06□□□□□ -0.16
RETP07949 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RETP07949 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RETP07949 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RETP07949 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RETP07949 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RETP07949 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 GEMIN8P4-201ENST00000380526 729 ntBASIC14.05□□□□□ -0.16
RETP07949 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms