Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.49□□□□□ -0.41
APOA1P02647 AC023141.5-201ENST00000458585 616 ntBASIC12.49□□□□□ -0.41
APOA1P02647 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
APOA1P02647 ALG3P1-201ENST00000508806 1114 ntBASIC12.49□□□□□ -0.41
APOA1P02647 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.49□□□□□ -0.41
APOA1P02647 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.49□□□□□ -0.41
APOA1P02647 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 AC005829.1-201ENST00000570002 483 ntBASIC12.49□□□□□ -0.41
APOA1P02647 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 AC010503.4-201ENST00000615487 688 ntBASIC12.49□□□□□ -0.41
APOA1P02647 AC007431.3-201ENST00000623221 587 ntBASIC12.49□□□□□ -0.41
APOA1P02647 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 AC012313.8-201ENST00000595059 5402 ntBASIC12.48□□□□□ -0.41
APOA1P02647 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 LRRC59-203ENST00000576448 1531 ntBASIC12.48□□□□□ -0.41
APOA1P02647 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOA1P02647 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AL358781.1-202ENST00000321081 1360 ntBASIC12.48□□□□□ -0.41
APOA1P02647 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 KLF2P2-201ENST00000416807 1039 ntBASIC12.48□□□□□ -0.41
APOA1P02647 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
APOA1P02647 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.48□□□□□ -0.41
APOA1P02647 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.48□□□□□ -0.41
APOA1P02647 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.48□□□□□ -0.41
APOA1P02647 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.48□□□□□ -0.41
APOA1P02647 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.48□□□□□ -0.41
APOA1P02647 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.48□□□□□ -0.41
APOA1P02647 AC138696.2-201ENST00000607376 223 ntBASIC12.48□□□□□ -0.41
APOA1P02647 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms