Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
COMMD3-BMI1R4GMX3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
COMMD3-BMI1R4GMX3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD3-BMI1R4GMX3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD3-BMI1R4GMX3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD3-BMI1R4GMX3 ANOS2P-203ENST00000472227 1816 ntBASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 GPX1-201ENST00000419349 1106 ntBASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD3-BMI1R4GMX3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 RAP2CP1-202ENST00000605179 643 ntBASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD3-BMI1R4GMX3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD3-BMI1R4GMX3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD3-BMI1R4GMX3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.89■□□□□ 0.93
COMMD3-BMI1R4GMX3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD3-BMI1R4GMX3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD3-BMI1R4GMX3 AL391422.3-201ENST00000603791 2761 ntBASIC20.89■□□□□ 0.93
COMMD3-BMI1R4GMX3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD3-BMI1R4GMX3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.88■□□□□ 0.93
COMMD3-BMI1R4GMX3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms