Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01558Q9Y6Z2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01558Q9Y6Z2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01558Q9Y6Z2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01558Q9Y6Z2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01558Q9Y6Z2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01558Q9Y6Z2 AC092053.2-201ENST00000640557 1818 ntBASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01558Q9Y6Z2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 AL157384.1-201ENST00000445995 2473 ntBASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 ANOS2P-203ENST00000472227 1816 ntBASIC11.7□□□□□ -0.54
LINC01558Q9Y6Z2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
LINC01558Q9Y6Z2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01558Q9Y6Z2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms