Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA2Q9Y5H9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 AL138724.1-201ENST00000606771 1088 ntBASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 AC241377.3-202ENST00000626088 1088 ntBASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 AC241585.3-202ENST00000628937 1088 ntBASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 AC245100.8-202ENST00000629247 1058 ntBASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA2Q9Y5H9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHA2Q9Y5H9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 MIR939-201ENST00000401314 82 ntBASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 AF213884.3-201ENST00000563833 479 ntBASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 MIR4767-201ENST00000582827 78 ntBASIC25.14■■□□□ 1.62
PCDHA2Q9Y5H9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA2Q9Y5H9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA2Q9Y5H9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDHA2Q9Y5H9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA2Q9Y5H9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 AP001330.3-201ENST00000520123 633 ntBASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 AC011298.3-201ENST00000615796 283 ntBASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA2Q9Y5H9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA2Q9Y5H9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PCDHA2Q9Y5H9 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA2Q9Y5H9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA2Q9Y5H9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 ANOS2P-203ENST00000472227 1816 ntBASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 AC091305.1-201ENST00000479476 895 ntBASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.08■■□□□ 1.61
PCDHA2Q9Y5H9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
PCDHA2Q9Y5H9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
PCDHA2Q9Y5H9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.08■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms