Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 FP325331.1-202ENST00000623531 1380 ntBASIC23.57■■□□□ 1.36
YIPF1Q9Y548 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 DUX4L4-201ENST00000566884 1269 ntBASIC23.57■■□□□ 1.36
YIPF1Q9Y548 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
YIPF1Q9Y548 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 AC092666.2-201ENST00000613287 246 ntBASIC23.56■■□□□ 1.36
YIPF1Q9Y548 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 TSPY26P-201ENST00000476365 1326 ntBASIC23.56■■□□□ 1.36
YIPF1Q9Y548 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
YIPF1Q9Y548 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
YIPF1Q9Y548 AC144652.1-201ENST00000609974 1624 ntBASIC23.55■■□□□ 1.36
YIPF1Q9Y548 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 LINC01124-201ENST00000409786 2117 ntBASIC23.54■■□□□ 1.36
YIPF1Q9Y548 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.54■■□□□ 1.36
YIPF1Q9Y548 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 AC104564.3-201ENST00000582367 638 ntBASIC23.53■■□□□ 1.36
YIPF1Q9Y548 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 LINC00543-201ENST00000567234 1845 ntBASIC23.53■■□□□ 1.36
YIPF1Q9Y548 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
YIPF1Q9Y548 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.52■■□□□ 1.36
YIPF1Q9Y548 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
YIPF1Q9Y548 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 LINC01529-204ENST00000636474 1715 ntBASIC23.51■■□□□ 1.35
YIPF1Q9Y548 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 OR2I1P-207ENST00000453522 948 ntBASIC23.51■■□□□ 1.35
YIPF1Q9Y548 IGHV3-19-201ENST00000521488 291 ntBASIC23.51■■□□□ 1.35
YIPF1Q9Y548 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 AC010525.1-201ENST00000585559 441 ntBASIC23.51■■□□□ 1.35
YIPF1Q9Y548 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
YIPF1Q9Y548 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
YIPF1Q9Y548 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms