Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 AF131216.4-201ENST00000638924 1588 ntBASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 THA1P-201ENST00000590384 1145 ntBASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 ESRRAP2-201ENST00000418437 1549 ntBASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 AC127496.7-201ENST00000625110 1798 ntBASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.23■□□□□ 0.67
MRPS28Q9Y2Q9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 ABHD17AP5-201ENST00000580133 923 ntBASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 MIR4281-201ENST00000580852 62 ntBASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS28Q9Y2Q9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 KRT18P24-201ENST00000344739 1156 ntBASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 NTF6A-201ENST00000591175 560 ntBASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
MRPS28Q9Y2Q9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 AC004448.1-201ENST00000458332 883 ntBASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS28Q9Y2Q9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 AC242852.2-201ENST00000615738 1807 ntBASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPS28Q9Y2Q9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPS28Q9Y2Q9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 AC074183.2-201ENST00000623112 922 ntBASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 AL353803.4-201ENST00000565882 1934 ntBASIC19.17■□□□□ 0.66
MRPS28Q9Y2Q9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms