Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
R3HDM2Q9Y2K5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 LINC00565-201ENST00000562710 2331 ntBASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HDM2Q9Y2K5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HDM2Q9Y2K5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 LINC00526-201ENST00000581067 1875 ntBASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HDM2Q9Y2K5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 YBX1P4-201ENST00000392794 808 ntBASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.17■■□□□ 1.3
R3HDM2Q9Y2K5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HDM2Q9Y2K5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 AC137630.3-201ENST00000607245 391 ntBASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 ECEL1P1-201ENST00000373592 1742 ntBASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 CLDN5-201ENST00000403084 2357 ntBASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HDM2Q9Y2K5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
R3HDM2Q9Y2K5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
R3HDM2Q9Y2K5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.14■■□□□ 1.29
R3HDM2Q9Y2K5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
R3HDM2Q9Y2K5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
R3HDM2Q9Y2K5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.14■■□□□ 1.29
R3HDM2Q9Y2K5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.14■■□□□ 1.29
R3HDM2Q9Y2K5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 AL031848.2-201ENST00000607670 837 ntBASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
R3HDM2Q9Y2K5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3HDM2Q9Y2K5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms