Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 AC136469.2-201ENST00000623944 1028 ntBASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMP3Q9UQV4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.35■□□□□ 0.69
LAMP3Q9UQV4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 IRS3P-201ENST00000223076 1006 ntBASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 MIR6821-201ENST00000617625 74 ntBASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 AL161729.1-201ENST00000604104 1402 ntBASIC19.34■□□□□ 0.69
LAMP3Q9UQV4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LAMP3Q9UQV4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 MIR3181-201ENST00000578512 73 ntBASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMP3Q9UQV4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 AC097381.1-201ENST00000429019 1296 ntBASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMP3Q9UQV4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 AC233992.3-201ENST00000607491 485 ntBASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LAMP3Q9UQV4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 LINC01124-201ENST00000409786 2117 ntBASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms