Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 MIR663A-201ENST00000385250 93 ntBASIC21.18■□□□□ 0.98
LHX6Q9UPM6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 AC087239.1-201ENST00000622671 572 ntBASIC21.18■□□□□ 0.98
LHX6Q9UPM6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LHX6Q9UPM6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 C17orf82-201ENST00000623772 1530 ntBASIC21.16■□□□□ 0.98
LHX6Q9UPM6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 AC142086.2-201ENST00000569753 217 ntBASIC21.16■□□□□ 0.98
LHX6Q9UPM6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX6Q9UPM6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX6Q9UPM6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LHX6Q9UPM6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LHX6Q9UPM6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LHX6Q9UPM6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LHX6Q9UPM6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 AP005435.1-201ENST00000529293 1178 ntBASIC21.11■□□□□ 0.97
LHX6Q9UPM6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LHX6Q9UPM6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 KRT18P61-201ENST00000585825 1298 ntBASIC21.1■□□□□ 0.97
LHX6Q9UPM6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms