Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA7Q9UN72 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
PCDHA7Q9UN72 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA7Q9UN72 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA7Q9UN72 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA7Q9UN72 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA7Q9UN72 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 AL031848.2-201ENST00000607670 837 ntBASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDHA7Q9UN72 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA7Q9UN72 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 LINC00526-201ENST00000581067 1875 ntBASIC25.46■■□□□ 1.67
PCDHA7Q9UN72 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 ECEL1P1-201ENST00000373592 1742 ntBASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA7Q9UN72 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA7Q9UN72 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDHA7Q9UN72 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
PCDHA7Q9UN72 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA7Q9UN72 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA7Q9UN72 LINC00565-201ENST00000562710 2331 ntBASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 AC021242.3-201ENST00000607598 1377 ntBASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA7Q9UN72 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA7Q9UN72 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 AC144652.1-201ENST00000609974 1624 ntBASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHA7Q9UN72 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms