Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 SLC25A24-204ENST00000569674 2357 ntBASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGB4Q9UN71 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHGB4Q9UN71 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB4Q9UN71 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGB4Q9UN71 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 ATP5G2P3-201ENST00000429083 425 ntBASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHGB4Q9UN71 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 AC137767.1-201ENST00000602918 1920 ntBASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 AC004987.1-201ENST00000428627 508 ntBASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHGB4Q9UN71 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB4Q9UN71 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 ANOS2P-203ENST00000472227 1816 ntBASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHGB4Q9UN71 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms