Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
THUMPD1Q9NXG2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 LINC00526-201ENST00000581067 1875 ntBASIC21.01■□□□□ 0.95
THUMPD1Q9NXG2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD1Q9NXG2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD1Q9NXG2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD1Q9NXG2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
THUMPD1Q9NXG2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD1Q9NXG2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 AL033527.3-201ENST00000566366 1196 ntBASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD1Q9NXG2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.98■□□□□ 0.95
THUMPD1Q9NXG2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 AC079630.1-202ENST00000618127 1840 ntBASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 AC103834.1-201ENST00000520383 144 ntBASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 AC137630.3-201ENST00000607245 391 ntBASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD1Q9NXG2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 AC103724.3-201ENST00000564481 992 ntBASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 SNX5-217ENST00000606557 1087 ntBASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
THUMPD1Q9NXG2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
THUMPD1Q9NXG2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD1Q9NXG2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD1Q9NXG2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.95■□□□□ 0.94
THUMPD1Q9NXG2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms