Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN4Q9NRR5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN4Q9NRR5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 AL353803.4-201ENST00000565882 1934 ntBASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
UBQLN4Q9NRR5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN4Q9NRR5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN4Q9NRR5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN4Q9NRR5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
UBQLN4Q9NRR5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN4Q9NRR5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBQLN4Q9NRR5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.58■□□□□ 0.88
UBQLN4Q9NRR5 LINC01529-204ENST00000636474 1715 ntBASIC20.58■□□□□ 0.88
UBQLN4Q9NRR5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UBQLN4Q9NRR5 C17orf82-201ENST00000623772 1530 ntBASIC20.58■□□□□ 0.88
UBQLN4Q9NRR5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN4Q9NRR5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN4Q9NRR5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN4Q9NRR5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN4Q9NRR5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 DUX4L4-201ENST00000566884 1269 ntBASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN4Q9NRR5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.52■□□□□ 0.88
UBQLN4Q9NRR5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms