Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT46Q9NQC8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFT46Q9NQC8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 AC137767.1-201ENST00000602918 1920 ntBASIC19.19■□□□□ 0.66
IFT46Q9NQC8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
IFT46Q9NQC8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
IFT46Q9NQC8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 AL022069.1-201ENST00000568025 1636 ntBASIC19.17■□□□□ 0.66
IFT46Q9NQC8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT46Q9NQC8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT46Q9NQC8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.15■□□□□ 0.66
IFT46Q9NQC8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT46Q9NQC8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms