Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 AL355001.2-201ENST00000620617 1191 ntBASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 AC142381.2-201ENST00000566120 298 ntBASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 MIR3181-201ENST00000578512 73 ntBASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF304Q9HCX3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 MIR4767-201ENST00000582827 78 ntBASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 FP325331.1-202ENST00000623531 1380 ntBASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF304Q9HCX3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 AL031432.3-201ENST00000607698 485 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 pRNA.6-201ENST00000610482 90 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 pRNA.5-201ENST00000612139 90 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 pRNA.11-201ENST00000618423 90 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 pRNA.13-201ENST00000619112 90 ntBASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF304Q9HCX3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 SUDS3P1-201ENST00000505831 966 ntBASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF304Q9HCX3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 AC144652.1-201ENST00000609974 1624 ntBASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF304Q9HCX3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
ZNF304Q9HCX3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF304Q9HCX3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms