Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 pRNA.6-201ENST00000610482 90 ntBASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 pRNA.5-201ENST00000612139 90 ntBASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 pRNA.11-201ENST00000618423 90 ntBASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 pRNA.13-201ENST00000619112 90 ntBASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VAT1LQ9HCJ6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VAT1LQ9HCJ6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
VAT1LQ9HCJ6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VAT1LQ9HCJ6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VAT1LQ9HCJ6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.97■■□□□ 1.75
VAT1LQ9HCJ6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 AC133561.4-201ENST00000566112 224 ntBASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.96■■□□□ 1.75
VAT1LQ9HCJ6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.95■■□□□ 1.75
VAT1LQ9HCJ6 AC079630.1-202ENST00000618127 1840 ntBASIC25.95■■□□□ 1.75
VAT1LQ9HCJ6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
VAT1LQ9HCJ6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 AC144652.1-201ENST00000609974 1624 ntBASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
VAT1LQ9HCJ6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 MIR4767-201ENST00000582827 78 ntBASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
VAT1LQ9HCJ6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.93■■□□□ 1.74
VAT1LQ9HCJ6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.93■■□□□ 1.74
VAT1LQ9HCJ6 AL031432.3-201ENST00000607698 485 ntBASIC25.93■■□□□ 1.74
VAT1LQ9HCJ6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.93■■□□□ 1.74
VAT1LQ9HCJ6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 FP325331.1-202ENST00000623531 1380 ntBASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
VAT1LQ9HCJ6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 AC142381.2-201ENST00000566120 298 ntBASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 LINC01529-204ENST00000636474 1715 ntBASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.91■■□□□ 1.74
VAT1LQ9HCJ6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 AL138724.1-201ENST00000606771 1088 ntBASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 AL355001.2-201ENST00000620617 1191 ntBASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
VAT1LQ9HCJ6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 EDA-201ENST00000338901 1233 ntBASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 SUDS3P1-201ENST00000505831 966 ntBASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 AC011298.3-201ENST00000615796 283 ntBASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.89■■□□□ 1.74
VAT1LQ9HCJ6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.89■■□□□ 1.73
VAT1LQ9HCJ6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.89■■□□□ 1.73
VAT1LQ9HCJ6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.89■■□□□ 1.73
VAT1LQ9HCJ6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms