Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SND1-IT1Q9HBX3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SND1-IT1Q9HBX3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SND1-IT1Q9HBX3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SND1-IT1Q9HBX3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.96□□□□□ -0.02
SND1-IT1Q9HBX3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SND1-IT1Q9HBX3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 AC242852.2-201ENST00000615738 1807 ntBASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 AC026202.3-201ENST00000600805 1127 ntBASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.94□□□□□ -0.02
SND1-IT1Q9HBX3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.93□□□□□ -0.02
SND1-IT1Q9HBX3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 AL161729.1-201ENST00000604104 1402 ntBASIC14.92□□□□□ -0.02
SND1-IT1Q9HBX3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SND1-IT1Q9HBX3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 AL137060.1-201ENST00000618151 2648 ntBASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.9□□□□□ -0.02
SND1-IT1Q9HBX3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 AC090877.2-201ENST00000558441 1738 ntBASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms