Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRTM1Q9HBL6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 AL353803.4-201ENST00000565882 1934 ntBASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRTM1Q9HBL6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.5■■□□□ 1.03
LRTM1Q9HBL6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
LRTM1Q9HBL6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 GUSBP5-202ENST00000510805 1989 ntBASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRTM1Q9HBL6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 EP400NL-214ENST00000641289 2402 ntBASIC21.47■■□□□ 1.03
LRTM1Q9HBL6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRTM1Q9HBL6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRTM1Q9HBL6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 ESRRAP2-201ENST00000418437 1549 ntBASIC21.44■■□□□ 1.02
LRTM1Q9HBL6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 AC144652.1-201ENST00000609974 1624 ntBASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.43■■□□□ 1.02
LRTM1Q9HBL6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRTM1Q9HBL6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms