Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 MTDHP2-201ENST00000601468 714 ntBASIC21.46■■□□□ 1.03
BRF2Q9HAW0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
BRF2Q9HAW0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 AL451085.2-201ENST00000605085 799 ntBASIC21.45■■□□□ 1.02
BRF2Q9HAW0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRF2Q9HAW0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BRF2Q9HAW0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRF2Q9HAW0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.42■■□□□ 1.02
BRF2Q9HAW0 FP325331.1-202ENST00000623531 1380 ntBASIC21.42■■□□□ 1.02
BRF2Q9HAW0 C1orf229-201ENST00000623686 2258 ntBASIC21.42■■□□□ 1.02
BRF2Q9HAW0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 AC010997.5-201ENST00000609182 354 ntBASIC21.41■■□□□ 1.02
BRF2Q9HAW0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.41■■□□□ 1.02
BRF2Q9HAW0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BRF2Q9HAW0 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.4■■□□□ 1.02
BRF2Q9HAW0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.4■■□□□ 1.02
BRF2Q9HAW0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRF2Q9HAW0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRF2Q9HAW0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.39■■□□□ 1.02
BRF2Q9HAW0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
BRF2Q9HAW0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BRF2Q9HAW0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.39■■□□□ 1.02
BRF2Q9HAW0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRF2Q9HAW0 LINC01529-204ENST00000636474 1715 ntBASIC21.39■■□□□ 1.01
BRF2Q9HAW0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.39■■□□□ 1.01
BRF2Q9HAW0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRF2Q9HAW0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
BRF2Q9HAW0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
BRF2Q9HAW0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 AC233723.2-201ENST00000623798 2106 ntBASIC21.38■■□□□ 1.01
BRF2Q9HAW0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.38■■□□□ 1.01
BRF2Q9HAW0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
BRF2Q9HAW0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 TSPY9P-201ENST00000440215 945 ntBASIC21.36■■□□□ 1.01
BRF2Q9HAW0 TSPY11P-201ENST00000442607 1045 ntBASIC21.36■■□□□ 1.01
BRF2Q9HAW0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRF2Q9HAW0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
BRF2Q9HAW0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.35■■□□□ 1.01
BRF2Q9HAW0 AL117328.2-201ENST00000624617 1940 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms