Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCNX3Q9H6A9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCNX3Q9H6A9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCNX3Q9H6A9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCNX3Q9H6A9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.42■□□□□ 0.86
PCNX3Q9H6A9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 AC006455.2-201ENST00000429931 906 ntBASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCNX3Q9H6A9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.4■□□□□ 0.86
PCNX3Q9H6A9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCNX3Q9H6A9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCNX3Q9H6A9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCNX3Q9H6A9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCNX3Q9H6A9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 SUDS3P1-201ENST00000505831 966 ntBASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 FP325331.1-202ENST00000623531 1380 ntBASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.39■□□□□ 0.86
PCNX3Q9H6A9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCNX3Q9H6A9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCNX3Q9H6A9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
PCNX3Q9H6A9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCNX3Q9H6A9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCNX3Q9H6A9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.38■□□□□ 0.85
PCNX3Q9H6A9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 AC008406.3-201ENST00000620001 1374 ntBASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCNX3Q9H6A9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 AC099791.2-201ENST00000605725 427 ntBASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PCNX3Q9H6A9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCNX3Q9H6A9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.35■□□□□ 0.85
PCNX3Q9H6A9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCNX3Q9H6A9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCNX3Q9H6A9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.35■□□□□ 0.85
PCNX3Q9H6A9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.34■□□□□ 0.85
PCNX3Q9H6A9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 DUSP8P5-201ENST00000422884 1815 ntBASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms