Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SLC7A5P2-201ENST00000553010 536 ntBASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 pRNA.6-201ENST00000610482 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 pRNA.5-201ENST00000612139 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 pRNA.11-201ENST00000618423 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 pRNA.13-201ENST00000619112 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CNTNAP3Q9BZ76 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 SLC29A4P1-201ENST00000398760 971 ntBASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNTNAP3Q9BZ76 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 DUSP5P2-201ENST00000426873 1033 ntBASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 ECEL1P3-201ENST00000427961 737 ntBASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 AC004854.2-201ENST00000608450 1441 ntBASIC21.45■■□□□ 1.02
CNTNAP3Q9BZ76 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 AC133041.1-202ENST00000642053 222 ntBASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNTNAP3Q9BZ76 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3Q9BZ76 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3Q9BZ76 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 GCSHP5-201ENST00000443090 522 ntBASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3Q9BZ76 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 KRT18P11-201ENST00000435214 1283 ntBASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 DUX4L4-201ENST00000566884 1269 ntBASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3Q9BZ76 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3Q9BZ76 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3Q9BZ76 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3Q9BZ76 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3Q9BZ76 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3Q9BZ76 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms