Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF4Q9BUZ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 MIR638-201ENST00000385237 100 ntBASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAF4Q9BUZ4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 SNX5-217ENST00000606557 1087 ntBASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF4Q9BUZ4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF4Q9BUZ4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 MIR4466-201ENST00000606121 54 ntBASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 AC004812.2-201ENST00000611079 2094 ntBASIC19.89■□□□□ 0.77
TRAF4Q9BUZ4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 AL512631.2-201ENST00000604634 923 ntBASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 MIR6722-201ENST00000617286 78 ntBASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 AC007375.3-201ENST00000600936 2314 ntBASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAF4Q9BUZ4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAF4Q9BUZ4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAF4Q9BUZ4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
TRAF4Q9BUZ4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms