Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDL1Q9BU40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 ALDH1A3-203ENST00000557963 1670 ntBASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRDL1Q9BU40 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRDL1Q9BU40 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRDL1Q9BU40 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRDL1Q9BU40 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.64■□□□□ 0.42
CHRDL1Q9BU40 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 AC004448.1-201ENST00000458332 883 ntBASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRDL1Q9BU40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 AC137630.3-201ENST00000607245 391 ntBASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRDL1Q9BU40 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRDL1Q9BU40 RARRES2P1-201ENST00000474487 481 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms