Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.6■□□□□ 0.73
VRK1Q99986 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.6■□□□□ 0.73
VRK1Q99986 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK1Q99986 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VRK1Q99986 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK1Q99986 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK1Q99986 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.59■□□□□ 0.73
VRK1Q99986 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VRK1Q99986 MIR6089-201ENST00000616698 64 ntBASIC19.59■□□□□ 0.73
VRK1Q99986 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VRK1Q99986 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VRK1Q99986 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VRK1Q99986 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.58■□□□□ 0.73
VRK1Q99986 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VRK1Q99986 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.58■□□□□ 0.73
VRK1Q99986 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.58■□□□□ 0.73
VRK1Q99986 AC005703.6-201ENST00000623265 1329 ntBASIC19.58■□□□□ 0.73
VRK1Q99986 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VRK1Q99986 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.58■□□□□ 0.72
VRK1Q99986 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.58■□□□□ 0.72
VRK1Q99986 AL139246.5-201ENST00000606645 996 ntBASIC19.58■□□□□ 0.72
VRK1Q99986 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK1Q99986 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
VRK1Q99986 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VRK1Q99986 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VRK1Q99986 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.58■□□□□ 0.72
VRK1Q99986 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VRK1Q99986 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.57■□□□□ 0.72
VRK1Q99986 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.57■□□□□ 0.72
VRK1Q99986 AL512631.2-201ENST00000604634 923 ntBASIC19.57■□□□□ 0.72
VRK1Q99986 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VRK1Q99986 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VRK1Q99986 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.56■□□□□ 0.72
VRK1Q99986 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 AL022069.1-201ENST00000568025 1636 ntBASIC19.56■□□□□ 0.72
VRK1Q99986 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
VRK1Q99986 AC096631.2-201ENST00000436136 790 ntBASIC19.56■□□□□ 0.72
VRK1Q99986 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.56■□□□□ 0.72
VRK1Q99986 C9orf163-202ENST00000624034 2573 ntBASIC19.56■□□□□ 0.72
VRK1Q99986 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.56■□□□□ 0.72
VRK1Q99986 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.56■□□□□ 0.72
VRK1Q99986 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.56■□□□□ 0.72
VRK1Q99986 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VRK1Q99986 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VRK1Q99986 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VRK1Q99986 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VRK1Q99986 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VRK1Q99986 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.55■□□□□ 0.72
VRK1Q99986 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 AC131274.2-201ENST00000580697 1507 ntBASIC19.55■□□□□ 0.72
VRK1Q99986 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VRK1Q99986 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VRK1Q99986 AL117328.2-201ENST00000624617 1940 ntBASIC19.55■□□□□ 0.72
VRK1Q99986 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.54■□□□□ 0.72
VRK1Q99986 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.54■□□□□ 0.72
VRK1Q99986 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VRK1Q99986 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
VRK1Q99986 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.54■□□□□ 0.72
VRK1Q99986 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VRK1Q99986 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VRK1Q99986 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.53■□□□□ 0.72
VRK1Q99986 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VRK1Q99986 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK1Q99986 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK1Q99986 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VRK1Q99986 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms