Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SDHCQ99643 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
SDHCQ99643 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SDHCQ99643 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHCQ99643 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SDHCQ99643 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHCQ99643 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHCQ99643 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 HLA-V-202ENST00000446817 847 ntBASIC19.41■□□□□ 0.7
SDHCQ99643 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.41■□□□□ 0.7
SDHCQ99643 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHCQ99643 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.4■□□□□ 0.7
SDHCQ99643 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SDHCQ99643 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SDHCQ99643 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHCQ99643 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SDHCQ99643 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SDHCQ99643 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SDHCQ99643 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SDHCQ99643 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHCQ99643 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.69
SDHCQ99643 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SDHCQ99643 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHCQ99643 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHCQ99643 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHCQ99643 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SDHCQ99643 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.38■□□□□ 0.69
SDHCQ99643 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.38■□□□□ 0.69
SDHCQ99643 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.38■□□□□ 0.69
SDHCQ99643 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDHCQ99643 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.38■□□□□ 0.69
SDHCQ99643 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHCQ99643 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
SDHCQ99643 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SDHCQ99643 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SDHCQ99643 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHCQ99643 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHCQ99643 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHCQ99643 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHCQ99643 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.37■□□□□ 0.69
SDHCQ99643 AL391422.3-201ENST00000603791 2761 ntBASIC19.37■□□□□ 0.69
SDHCQ99643 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHCQ99643 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHCQ99643 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHCQ99643 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SDHCQ99643 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SDHCQ99643 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.37■□□□□ 0.69
SDHCQ99643 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHCQ99643 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHCQ99643 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SDHCQ99643 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHCQ99643 AC007952.6-201ENST00000573168 2673 ntBASIC19.36■□□□□ 0.69
SDHCQ99643 AC003957.1-201ENST00000625108 2673 ntBASIC19.36■□□□□ 0.69
SDHCQ99643 AC087741.3-201ENST00000624270 1347 ntBASIC19.36■□□□□ 0.69
SDHCQ99643 LINC01521-201ENST00000504184 1943 ntBASIC19.36■□□□□ 0.69
SDHCQ99643 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SDHCQ99643 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHCQ99643 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SDHCQ99643 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.35■□□□□ 0.69
SDHCQ99643 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SDHCQ99643 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.35■□□□□ 0.69
SDHCQ99643 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SDHCQ99643 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms